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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61351693 chr5:46370123 A/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.94 1.42E-14 Box Plot
THCA rs6136100 chr20:17430883 C/T PNLIP chr10:118305443-118327367:+ 0.21 6.2 1.21E-9 Box Plot
THCA rs61370232 chr2:101180498 G/A LOC285359 chr3:101431278-101432259:+ 0.53 12.33 1.53E-30 Box Plot
THCA rs61370515 chr2:132192311 C/T CCDC74B chr2:130896860-130902707:- 0.4 6.98 9.78E-12 Box Plot
THCA rs61401493 chr3:181273181 G/A SMUG1 chr12:54515061-54582792:- -0.26 -5.96 4.87E-9 Box Plot
THCA rs61418463 chr10:51813788 C/T FAM21B chr10:47894023-47949412:+ 0.67 8.51 2.32E-16 Box Plot
THCA rs61426048 chr8:11784956 A/G SGK223 chr8:8175258-8244008:- 0.35 6.46 2.57E-10 Box Plot
THCA rs61427182 chr8:10866603 G/T SGK223 chr8:8175258-8244008:- 0.35 6.35 4.91E-10 Box Plot
THCA rs61448912 chr7:140146528 GC/G LOC441455 chr9:99488103-99489749:+ 0.5 6.65 8.03E-11 Box Plot
THCA rs614495 chr11:77536886 T/A INTS4L1 chr7:64601603-64694600:+ 0.62 10.05 1.05E-21 Box Plot
THCA rs61460223 chr5:151683570 T/G FILIP1L chr3:99548985-99833357:- 0.22 6.22 1.1E-9 Box Plot
THCA rs61467390 chr2:101118160 C/A LOC285359 chr3:101431278-101432259:+ 0.35 6.7 5.77E-11 Box Plot
THCA rs61468577 chr8:11784925 A/C SGK223 chr8:8175258-8244008:- 0.36 6.51 1.86E-10 Box Plot
THCA rs61469620 chr17:67625098 G/A HAP1 chr17:39873994-39890896:- -0.43 -6.22 1.1E-9 Box Plot
THCA rs61470890 chr8:10754275 AT/A SGK223 chr8:8175258-8244008:- 0.37 7.26 1.62E-12 Box Plot